Index

A

AnnotatePlugin (class in bsPlugins.Annotate)

B

Bam2DensityPlugin (class in bsPlugins.Bam2Density)

BedToolsPlugin (class in bsPlugins.BedTools)

C

clean_deseq_output() (bsPlugins.DESeq.DESeqPlugin method)

ComplementPlugin (class in bsPlugins.Combine)

D

DESeqPlugin (class in bsPlugins.DESeq)

DomainogramsPlugin (class in bsPlugins.Domainograms)

F

FileConvertPlugin (class in bsPlugins.FileConvert) FileStatisticsPlugin (class in bsPlugins.FileStatistics)

FilteringPlugin (class in bsPlugins.Filtering)

G

GenomeGraphPlugin (class in bsPlugins.GenomeGraph)

I

IntersectionsPlugin (class in bsPlugins.Intersections)

IntersectPlugin (class in bsPlugins.Combine)

L

List2TrackPlugin (class in bsPlugins.List2Track)

M

MaplotPlugin (class in bsPlugins.Maplot) MergeTracksPlugin (class in bsPlugins.MergeTracks)

MotifScanPlugin (class in bsPlugins.MotifScan) MotifSearchPlugin (class in bsPlugins.MotifSearch)

N

NormalizePlugin (class in bsPlugins.Normalize)

NumericOperationPlugin (class in bsPlugins.NumericOperation)

O

OverlapPlugin (class in bsPlugins.Overlap)

P

PairedEndPlugin (class in bsPlugins.PairedEnd)

Q

QuantifyTablePlugin (class in bsPlugins.QuantifyTable)

R

RatiosPlugin (class in bsPlugins.Ratios)

S

SmoothingPlugin (class in bsPlugins.Smoothing)

SubtractPlugin (class in bsPlugins.Combine)

T

Table2TracksPlugin (class in bsPlugins.Table2Tracks)

TopGoPlugin (class in bsPlugins.TopGo)

U

UnionPlugin (class in bsPlugins.Combine)

V

VennDiagramPlugin (class in bsPlugins.VennDiagram)