################## Plugins collection ################## .. autoclass:: bsPlugins.Annotate.AnnotatePlugin :members: .. autoclass:: bsPlugins.Bam2Density.Bam2DensityPlugin :members: .. autoclass:: bsPlugins.BedTools.BedToolsPlugin :members: .. autoclass:: bsPlugins.Combine.IntersectPlugin :members: .. autoclass:: bsPlugins.Combine.UnionPlugin :members: .. autoclass:: bsPlugins.Combine.SubtractPlugin :members: .. autoclass:: bsPlugins.Combine.ComplementPlugin :members: .. autoclass:: bsPlugins.DESeq.DESeqPlugin :members: .. autoclass:: bsPlugins.Domainograms.DomainogramsPlugin :members: .. autoclass:: bsPlugins.FileConvert.FileConvertPlugin :members: .. autoclass:: bsPlugins.FileStatistics.FileStatisticsPlugin :members: .. autoclass:: bsPlugins.Filtering.FilteringPlugin :members: .. autoclass:: bsPlugins.GenomeGraph.GenomeGraphPlugin :members: .. autoclass:: bsPlugins.Intersections.IntersectionsPlugin :members: .. autoclass:: bsPlugins.List2Track.List2TrackPlugin :members: .. autoclass:: bsPlugins.Maplot.MaplotPlugin :members: .. autoclass:: bsPlugins.MergeTracks.MergeTracksPlugin :members: .. autoclass:: bsPlugins.MotifScan.MotifScanPlugin :members: .. autoclass:: bsPlugins.MotifSearch.MotifSearchPlugin :members: .. autoclass:: bsPlugins.Normalize.NormalizePlugin :members: .. autoclass:: bsPlugins.NumericOperation.NumericOperationPlugin :members: .. autoclass:: bsPlugins.Overlap.OverlapPlugin :members: .. autoclass:: bsPlugins.PairedEnd.PairedEndPlugin :members: .. autoclass:: bsPlugins.PairsPlot.PairsPlotPlugin :members: .. autoclass:: bsPlugins.PlotFeatures.PlotFeaturesPlugin :members: .. autoclass:: bsPlugins.QuantifyTable.QuantifyTablePlugin :members: .. autoclass:: bsPlugins.Ratios.RatiosPlugin :members: .. autoclass:: bsPlugins.Smoothing.SmoothingPlugin :members: .. autoclass:: bsPlugins.Table2Tracks.Table2TracksPlugin :members: .. autoclass:: bsPlugins.TopGo.TopGoPlugin :members: .. autoclass:: bsPlugins.VennDiagram.VennDiagramPlugin :members: